RiboswitchDB

Genome: Synechococcus sp. CC9605 (NC_007516.1); Phylum: Cyanobacteria/Melainabacteria group

S.No.

Riboswitch Location and Strand

Riboswitch class

Downstream gene location and Strand

Downstream gene name/gene product description

Locus_tag of downstream gene

Single gene/within operon (According to DOOR database)

Operon details (List of genes within operon and their Locus_tag)

Predicted Structure

1

119111-119217 (+)

TPP

120806-122816 (-)

Syncc9605_0124

Transketolase

Operon

DOOR ID: 151911

Syncc9605_0124,
Syncc9605_0125,
Syncc9605_0126 (acpP)

2

1021560-1021660 (-)

ykkC-yxkD

1020342-1021533 (-)

Syncc9605_1082

Putative agmatine ureohydrolase

Operon

DOOR ID: 152111

Syncc9605_1076,
Syncc9605_1077,
Syncc9605_1078,
Syncc9605_1079,
Syncc9605_1080,
Syncc9605_1081,
Syncc9605_1082

3

1464173-1464322 (-)

cobalamin

1463532-1464165 (-)

Syncc9605_1592

Putative hydrogenase accessory protein

Single gene

DOOR ID: 1717190

Syncc9605_1592

4

1474958-1475101 (-)

cobalamin

1473822-1474941 (-)

Syncc9605_1603

Single gene

DOOR ID: 1717193

Syncc9605_1603

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