Genome: Pelobacter carbinolicus DSM 2380 (NC_007498.2); Phylum: delta/epsilon subdivisions
S.No.Riboswitch Location and StrandRiboswitch classDownstream gene location and StrandDownstream gene name/gene product descriptionLocus_tag of downstream geneSingle gene/within operon (According to DOOR database)Operon details (List of genes within operon and their Locus_tag)Predicted Structure
1 319211-319337 (+)MOCO319672-320890 (+)moeA

Molybdopterin--molybdenum ligase		Pcar_0256Single gene

DOOR ID: 1707223		Pcar_0256 (moeA) View Structure
2 516352-516461 (-)SAM515136-516255 (-)metX

Homoserine O-acetyltransferase (HAT) (1) (Homoserine transacetylase) (HTA)		Pcar_0422Single gene

DOOR ID: 1707293		Pcar_0422 (met2) View Structure
3 538676-538801 (+)cobalamin539012-541289 (+)metE

5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (4) (Cobalamin-independent methionine synthase) (Methionine synthase; vitamin-B12 independent isozyme)		Pcar_0442Single gene

DOOR ID: 1707307		Pcar_0442 (metE) View Structure
4 554500-554679 (-)cobalamin552418-554359 (-)btuB

Cobalamin uptake ligand-gated TonB-dependent outer membrane channel		Pcar_0454Single gene

DOOR ID: 1707310		Pcar_0454 (btuB) View Structure
5 556836-556955 (-)MOCO555066-556800 (-)aorA-2

Aldehyde:ferredoxin oxidoreductase; tungsten-containing		Pcar_0456Single gene

DOOR ID: 1707312		Pcar_0456 (aorA) View Structure
6 595087-595272 (-)cobalamin593709-594963 (-)cysG-2

Precorrin-2 dehydrogenase; sirohydrochlorin ferrochelatase; and uroporphyrinogen III C2;C7-methyltransferase; putative		Pcar_0489Operon

DOOR ID: 146918		Pcar_3206,
Pcar_0483,
Pcar_0484,
Pcar_0485 (cobS),
Pcar_0486 (cobT),
Pcar_0487,
Pcar_0488,
Pcar_0489		 View Structure
7 668443-668521 (-)c-di-GMP-I667759-668275 (-)cheW36H-3

Scaffold protein CheW associated with MCPs of class 36H		Pcar_0546single gene

DOOR ID: 1707348		Pcar_0546 (cheW) View Structure
8 742854-742960 (-)TPP741990-742797 (-)thiF-2

Thiamin biosynthesis thiocarboxylate synthase		Pcar_0611Operon

DOOR ID: 146938		Pcar_0607 (thiE-2),
Pcar_0608 (thiH),
Pcar_0609 (thiG),
Pcar_0610 (thiS-2),
Pcar_0611		 View Structure
9 804624-804745 (+)MOCO804780-806508 (+)aorA-3

Aldehyde:ferredoxin oxidoreductase; tungsten-containing		Pcar_0665Single gene

DOOR ID: 1707414		Pcar_0665 View Structure
10 1041555-1041703 (-)FMN1040806-1041460 (-)ribB

3;4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase) (2)		Pcar_0884Operon

DOOR ID: 146988		Pcar_0884 (ribB),
Pcar_3255,
Pcar_3256		 View Structure
11 1141626-1141702 (+)c-di-GMP-I1142141-1144481 (+)mcp36H-5

Methyl-accepting chemotaxis sensory transducer; class 36H; Cache_1 domain-containing		Pcar_0972single gene

DOOR ID: 1707518		Pcar_0972 View Structure
12 1141853-1141929 (+)c-di-GMP-I1142141-1144481 (+)mcp36H-5

Methyl-accepting chemotaxis sensory transducer; class 36H; Cache_1 domain-containing		Pcar_0972single gene

DOOR ID: 1707518		Pcar_0972 View Structure
13 1774619-1774697 (+)c-di-GMP-I1774858-1777954 (+)Pcar_1516

Calx-beta domain repeat and Amb_all domain protein		Pcar_1516single gene

DOOR ID: 1707725		Pcar_1516 View Structure
14 1987037-1987116 (+)c-di-GMP-I1987292-1988711 (+)Pcar_1703

Adenylyltransferase; putative		Pcar_1703single gene

DOOR ID: 1707779		Pcar_1703 View Structure
15 2380546-2380623 (+)c-di-GMP-I2380785-2382717 (+)Pcar_2046

Sensor diguanylate cyclase/phosphodiesterase; PAS domain-containing		Pcar_2046single gene

DOOR ID: 1707900		Pcar_2046 (morA) View Structure
16 2399735-2399816 (-)c-di-GMP-I2398996-2399440 (-)csuA

Sigma-fimbria adhesin; putative		Pcar_2060single gene

DOOR ID: 1707906		Pcar_2060 View Structure
17 2400022-2400104 (-)c-di-GMP-I2398996-2399440 (-)csuA

Sigma-fimbria adhesin; putative		Pcar_2060single gene

DOOR ID: 1707906		Pcar_2060 View Structure
18 2607862-2607968 (+)TPP2607998-2609471 (+)thiE%2FthiD

Thiamine-phosphate synthase (TP synthase) (TPS) (Thiamine-phosphate pyrophosphorylase) (TMP pyrophosphorylase) (TMP-PPase)		Pcar_2235Operon

DOOR ID: 147285		Pcar_2235 (thiD),
Pcar_2236		 View Structure
19 2648117-2648195 (-)c-di-GMP-I2646510-2648004 (-)Pcar_2266

Uncharacterized protein		Pcar_2266single gene

DOOR ID: 1707994		Pcar_2266 View Structure
20 2958678-2958797 (-)MOCO2956760-2958647 (-)Pcar_2514

Aldehyde:ferredoxin oxidoreductase; tungsten-containing		Pcar_2514Single gene

DOOR ID: 1708107		Pcar_2514 View Structure
21 3231175-3231262 (+)ZMP-ZTP3231307-3232384 (+)Pcar_2772

Aspartate/glutamate/phosphoserine/alanine/cystea te aminotransferase; putative		Pcar_2772Single gene

DOOR ID: 1708208		Pcar_2772 View Structure
22 3482493-3482692 (-)cobalamin3480374-3482330 (-)Pcar_2970

Ligand-gated TonB-dependent outer membrane channel		Pcar_2970Single gene

DOOR ID: 1708293		Pcar_2970 View Structure