RiboswitchDB

Genome: Streptococcus pyogenes MGAS10394 (NC_006086.1); Phylum: Firmicutes

S.No.

Riboswitch Location and Strand

Riboswitch class

Downstream gene location and Strand

Downstream gene name/gene product description

Locus_tag of downstream gene

Single gene/within operon (According to DOOR database)

Operon details (List of genes within operon and their Locus_tag)

Predicted Structure

1

349226-349349 (+)

FMN

349427-349991 (+)

M6_Spy0339

Riboflavin transporter

Operon

DOOR ID: 102638

M6_Spy0339,
M6_Spy0340

2

510694-510790 (-)

TPP

510085-510694 (-)

M6_Spy0520

Thiamine transporter

Single gene

DOOR ID: 1611419

M6_Spy0520

3

587341-587456 (+)

preQ1-II

588147-590106 (+)

ligA

DNA ligase (Polydeoxyribonucleotide synthase [NAD(+)])

Operon

DOOR ID: 102692

M6_Spy0590 (ligA),
M6_Spy0591

4

857664-857759 (+)

purine

857845-858427 (+)

M6_Spy0854

Xanthine phosphoribosyltransferase (XPRTase) (2)

Operon

DOOR ID: 102753

M6_Spy0854,
M6_Spy0855

5

969440-969526 (+)

glycine

969653-970976 (+)

M6_Spy0967

Na(+)-linked D-alanine glycine permease

Single gene

DOOR ID: 1611557

M6_Spy0967

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";}i:4;a:19:{i:0;i:4;i:1;s:11:"NC_006086.1";i:2;s:33:"Streptococcus pyogenes MGAS10394 ";i:3;s:10:"Firmicutes";i:4;s:4:"1239";i:5;s:13:"857664-857759";i:6;s:1:"+";i:7;s:6:"purine";i:8;s:0:"";i:9;s:13:"857845-858427";i:10;s:1:"+";i:11;s:10:"M6_Spy0854";i:12;s:48:"Xanthine phosphoribosyltransferase (XPRTase) (2)";i:13;s:10:"M6_Spy0854";i:14;s:6:"Operon";i:15;s:6:"102753";i:16;s:21:"M6_Spy0854;M6_Spy0855";i:17;s:109:"purine ribonucleoside salvage [GO:0006166]; xanthine metabolic process [GO:0046110]; XMP salvage [GO:0032265]";i:18;s:15:"View Structure
";}i:5;a:19:{i:0;i:5;i:1;s:11:"NC_006086.1";i:2;s:33:"Streptococcus pyogenes MGAS10394 ";i:3;s:10:"Firmicutes";i:4;s:4:"1239";i:5;s:13:"969440-969526";i:6;s:1:"+";i:7;s:7:"glycine";i:8;s:0:"";i:9;s:13:"969653-970976";i:10;s:1:"+";i:11;s:10:"M6_Spy0967";i:12;s:39:"Na(+)-linked D-alanine glycine permease";i:13;s:10:"M6_Spy0967";i:14;s:11:"Single gene";i:15;s:7:"1611557";i:16;s:10:"M6_Spy0967";i:17;s:0:"";i:18;s:15:"View Structure
";}}