adenine catabolic process amino acid transport AMP biosynthetic process anaerobic cobalamin biosynthetic process biotin biosynthetic process carbohydrate derivative biosynthetic process carbohydrate metabolic process carbohydrate transport cellular amino acid biosynthetic process cellular amino acid metabolic process cellular metabolic process cellulose catabolic process cobalamin biosynthetic process cobalamin transport cobalt ion transport cysteine biosynthetic process diaminopimelate biosynthetic process fluoride transmembrane transport glutamine metabolic process glycine catabolic process glycine decarboxylation via glycine cleavage system glycolytic process GMP biosynthetic process heme biosynthetic process hexose metabolic process histidine biosynthetic process homoserine biosynthetic process homoserine metabolic process hydrogen sulfide biosynthetic process IMP biosynthetic process ion transport isoleucine biosynthetic process L-lysine catabolic process L-methionine salvage leucine biosynthetic process lipid biosynthetic process lipid metabolic process lysine biosynthetic process methionine biosynthetic process methionine metabolic process methionine transport molybdate ion transport molybdopterin cofactor biosynthetic process nitrogen compound metabolic process nitrogen compound transport nitrogen fixation nucleoside metabolic process one-carbon metabolic process oxidation-reduction process phosphate ion transport potassium ion transport purine nucleotide biosynthetic process purine ribonucleoside salvage queuosine biosynthetic process queuosine salvage riboflavin biosynthetic process riboflavin transport S-adenosylmethionine biosynthetic process siderophore transport sodium ion transport sulfate reduction tetrahydrofolate interconversion thiamine biosynthetic process thiamine diphosphate biosynthetic process thiamine transport threonine biosynthetic process transmembrane transport tricarboxylic acid cycle valine biosynthetic process xylan catabolic process defense response to virus DNA integration DNA repair DNA replication DNA restriction-modification system fermentation mismatch repair response to antibiotic response to stress signal transduction